Table 5 Mean levels of consistency metrics by source (rank out of the 8 sources in parentheses)
From: Evaluating the consistency of gene sets used in the analysis of bacterial gene expression data
s mean,diff a | s mean,exp a | corr mean b | PC1b | ||
|---|---|---|---|---|---|
Gene Ontology | BP | 0.10 (7) | 1.23 (5) | 0.43 (6) | 0.37 (7) |
CC | 0.10 (5) | 1.26 (7) | 0.50 (3) | 0.42 (4) | |
MF | 0.10 (6) | 1.24 (6) | 0.42 (8) | 0.40 (6) | |
KEGG | 0.10 (8) | 1.28 (8) | 0.43 (7) | 0.31 (8) | |
MO: Predicted Operons | 0.06 (1) | 0.92 (1) | 0.57 (1) | 0.56 (1) | |
SEED | SS | 0.09 (4) | 1.19 (4) | 0.47 (5) | 0.41 (5) |
Scenarios | 0.08 (3) | 1.06 (3) | 0.49 (4) | 0.49 (2) | |
Paths | 0.08 (2) | 1.05 (2) | 0.50 (2) | 0.48 (3) | |