AbsIDconvert: An absolute approach for converting genetic identifiers at different granularities

BMC Bioinformatics

Table 5 Entrez ID to RefSeq ID conversion accuracy

Tool	Total Mapped	TP	FP	FN	TN	TPR	FPR	ACC	FDR	F1_score
AbsIDconvert	586	362	224	20	394	94.76	36.25	75.60	38.23	74.79
MADGene	551	335	216	49	400	87.24	35.06	73.50	39.20	71.66
Onto-Translate	501	291	210	99	400	74.62	34.43	69.10	41.92	65.32
DAVID	549	311	238	72	379	81.20	38.57	69.00	43.35	66.74
Synergizer	482	278	204	121	397	69.67	33.94	67.50	42.32	63.11
g:Convert	482	278	204	121	397	69.67	33.94	67.50	42.32	63.11
MatchMiner	474	268	206	126	400	68.02	33.99	66.80	43.46	61.75
Babelomics	501	267	234	128	371	67.59	38.68	63.80	46.71	59.60
Clone/Gene ID converter	421	219	202	195	384	52.90	34.47	60.30	47.98	52.46
HMS & ID	461	227	430	181	162	55.64	72.64	38.90	65.45	42.63

ISSN: 1471-2105