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Table 1 The percentage of probes removed per filtering step by LO-BaFL (on Agilent human expression 4 x 44 k microarrays) in comparison with the percentage removed by the BaFL method (on Affymetrix human expression U133Av2 arrays)

From: The LO-BaFL method and ALS microarray expression analysis

Applied filter % Probes filtered out (LO-BaFL) % Probes filtered out (BaFL)[7]
Cross-hybridization 8.63 % 60.30 %
Loss of target 0.99 % 2.19 %
SNP 2.53 % 1.78 %
ΔG 21.46 % 5.17 %