Table 1 The percentage of probes removed per filtering step by LO-BaFL (on Agilent human expression 4 x 44 k microarrays) in comparison with the percentage removed by the BaFL method (on Affymetrix human expression U133Av2 arrays)
From: The LO-BaFL method and ALS microarray expression analysis
Applied filter | % Probes filtered out (LO-BaFL) | % Probes filtered out (BaFL)[7] |
|---|---|---|
Cross-hybridization | 8.63 % | 60.30 % |
Loss of target | 0.99 % | 2.19 % |
SNP | 2.53 % | 1.78 % |
ΔG | 21.46 % | 5.17 % |