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Table 1 Number of pre-miRNAs from miRBase that are TE-derived or mis-annotated

From: ncRNAclassifier: a tool for detection and classification of transposable element sequences in RNA hairpins

 

Total of pre-miRNAs

Mis-annotated

TE-derived

Frog

182

1

3

Human

1037

235

152

Mouse

542

68

110

Nematode

200

2

5

Rat

359

28

21

Sea squirt

310

2

19

  1. Number of pre-miRNAs from miRBase that are TE-derived or mis-annotated for frog, human, mouse, nematode, rat, and sea squirt genomes.
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BMC Bioinformatics

ISSN: 1471-2105

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