Table 1 Description of AFLP loci without selection, selected using Model 1, selected using Model 2 and selected using fixed error rate thresholds
From: Simple regression models as a threshold for selecting AFLP loci with reduced error rates
Model | # of loci | Mean allele frequency | Error rate |
|---|---|---|---|
No Selection | 2711 | 0.169 | 12.53% |
Model 1 | 1173 | 0.181 | 8.83% |
Model 2 | 417 | 0.159 | 5.93% |
Fixed threshold 20% | 2062 | 0.088 | 6.96% |
Fixed threshold 10% | 1457 | 0.046 | 3.91% |
Fixed threshold 5% | 915 | 0.025 | 1.99% |