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Table 10 Comparing mGOASVM with a state-of-the-art multi-label plant predictor based on independent tests using the new plant dataset

From: mGOASVM: Multi-label protein subcellular localization based on gene ontology and support vector machines

Label

Subcellular location

Independent test locative accuracy

  

Plant-mPLoc [[41]]

mGOASVM

1

Cell membrane

8/16 = 50.0%

7/16 = 43.8%

2

Cell wall

0/1 = 0%

0/1 = 0%

3

Chloroplast

27/54 = 50.0%

39/54 = 72.2%

4

Cytoplasm

5/38 = 13.2%

19/38 = 50.0%

5

Endoplasmic reticulum

1/9 = 11.1%

3/9 = 33.3%

6

Extracellular

0/3 = 0%

1/3 = 33.3%

7

Golgi apparatus

3/7 = 42.9%

3/7 = 42.9%

8

Mitochondrion

6/16 = 37.5%

11/16 = 68.8%

9

Nucleus

31/46 = 67.4%

33/46 = 71.7%

10

Peroxisome

4/6 = 66.7%

3/6 = 50.0%

11

Plastid

0/1 = 0%

0/1 = 0%

12

Vacuole

2/7 = 28.6%

4/7 = 57.1%

Overall locative accuracy

87/204 = 42.7%

123/204 =60.3%

Overall actual accuracy

60/175 = 34.3%

97/175 = 55.4%