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Figure 6 | BMC Bioinformatics

Figure 6

From: Visualisation of variable binding pockets on protein surfaces by probabilistic analysis of related structure sets

Figure 6

Provar discriminates atoms and residues which persistently or variably contribute to pockets in an ensemble. (A) The atomic Provar score for a set of 50 conformers of IL-2 generated with tCONCOORD readily distinguishes those atoms persistently involved in pocket formation (dark red) from those only involved in pocket formation in minority of structures (light red). (B) Equivalent residue scores on a ribbon representation.

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