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Table 1 Mapsembler time and memory requirements on large data-sets

From: Mapsembler, targeted and micro assembly of large NGS datasets on a desktop computer

Reads data set Mapping time (s) Assembly time (s) Total time (s) Memory (MB)
S 10K <1 <1 1 <1.5
S 100K 1 2 5 <1.5
S 1M 14 6 40 <1.5
S 10M 170 95 442 <1.5
S 100M 1813 903 3983 <1.5
  1. Time and memory requirements for targeted assembly of 10 starters using increasingly large human genome read data sets. Mapping time corresponds to the mapping phase (Algorithm 1, Steps 1 to 5). Assembly time corresponds to the assembly phase (Steps 18 to 14) per iteration.