Figure 6
From: Methods for visual mining of genomic and proteomic data atlases
Cytoscape detectable proteins. Using Cytoscape, PeptideAtlas information can be overlaid on TCGA data in a network context, allowing users to locate potential biomarkers within the context of a given cancer network. In this instance genes that have been identified as having being important in cancer progression, through changes in gene dosage, are shown. The diamonds show loci of the genes, and the circles show the genes themselves. Information from PeptideAtlas, relating to if it is known if the corresponding protein is detectable, is overlaid.