Efficient and accurate greedy search methods for mining functional modules in protein interaction networks

BMC Bioinformatics

Table 6 List of top ten scoring modules identified by GSM-CA and their most enriched GO terms for Biological Process

ID	Size of module	Number of proteins enriched the same GO Term	Size of GO Term	Name of GO Term	p-value
1	35	33	221	rRNA processing	1.70e-41
2	42	38	323	ribosome biogenesis	1.61e-39
3	13	13	15	tRNA transcription	1.92e-35
4	19	14	19	mRNA polyadenylation	1.96e-31
5	11	11	12	cyclin catabolic process	8.92e-31
6	14	12	14	polyadenylation-dependent snoRNA 3'-end processing	1.91e-30
7	19	18	93	mitochondrial translation	8.08e-30
8	16	14	29	energy coupled proton transport, down electrochemical gradient	1.33e-29
9	22	14	20	RNA polymerase II transcriptional preinitiation complex assembly	2.70e-29
10	19	18	101	nuclear mRNA splicing, via spliceosome	8.91e-29

ISSN: 1471-2105