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Table 4 Datasets used for evaluating ModuleMiner

From: An effective method for network module extraction from microarray data

Serial. No

Dataset

No. of Genes/ No. of Conditions

Source

1

Yeast Sporulation

474/17

http://cmgm.stanford.edu/pbrown/sporulation/index.html

2

Yeast Diauxic Shift

689/72

Sample gene in expander

3

Subset of Yeast Cell Cycle

384/17

http://faculty.washington.edu/kayee/cluster

4

Arabidopsis Thaliana

138/8

http://homes.esat.kuleuven.be/~sistawww/bioi/thijs/Work/Clustering.html

5

Rat CNS

112/9

http://faculty.washington.edu/kayee/cluster

  1. The table 4 gives the description of various datasets used in ModuleMiner.
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BMC Bioinformatics

ISSN: 1471-2105

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