MAF | Shared | RPO | NAR |
|---|
0 | 36 | 107 | 952 |
0-0.05 | 29 | 124 | 31 |
0.05-0.10 | 27 | 77 | 4 |
0.1-0.2 | 29 | 98 | 5 |
0.2-0.3 | 26 | 97 | 3 |
0.3-0.4 | 25 | 72 | 2 |
0.4-0.5 | 33 | 79 | 4 |
tot | 205 | 654 | 1001 |
- Shared: markers genotyped by both DMET and AFFY
- RPO (Reference Panel Only): Number of markers that are present in DMET but not in AFFY
- NAR (Neither in AFFY nor in Reference Panel): Number of markers not contained in reference panel so these SNPs cannot be directly imputed
- For instance, 36 out of 205 shared SNPs, 107 out of 654 RPO SNPs and 952 out of 1001 NAR SNPs resulted to be monomorphic in the sample of 39 individual studied
