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Table 1 Initial data for the analysis of gain and loss of genes in distant phyla of the animal kingdom.

From: Computational workflow for analysis of gain and loss of genes in distantly related genomes

Species Source URL Number of models Input data size (MB)
Arabidopsis thaliana ftp://ftp.arabidopsis.org/home/tair/home/tair/ 27416 14.72
Amphimedon queenslandica http://getentry.ddbj.nig.ac.jp/top-e.html?ACUQ00000000 30060 11.87
Branchiostoma floridae http://genome.jgi-psf.org/Brafl1/Brafl1.home.html 50817 24.34
Capsaspora owczarzaki http://www.broadinstitute.org/annotation/genome/multicellularity_project/GenomeDescriptions.html 8792 6.2
Daphnia pulex http://wfleabase.org/genome/Daphnia_pulex/ 30810 10.94
Homo sapiens http://www.gencodegenes.org/ 87069 42.55
Lottia gigantea http://genome.jgi-psf.org/Lotgi1/Lotgi1.home.html 23851 9.72
Monosiga brevicollis http://genome.jgi-psf.org/Monbr1/Monbr1.home.html 9171 5.77
Nematostella vectensis http://genome.jgi-psf.org/Nemve1/Nemve1.home.html 27273 9.76
Saccoglossus kowalevskii ftp://ftp.hgsc.bcm.tmc.edu/pub/data/Skowalevskii/fasta 13149 8.14
Trichoplax adhaerens http://genome.jgi-psf.org/Triad1/Triad1.home.html 27416 14.72
Strongylocentrotus purpuratus http://www.spbase.org/SpBase/download/ 42420 22.07