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Table 2 Summary of endogenous calculations for 28 peptides from 8 proteins.

From: Statistical characterization of multiple-reaction monitoring mass spectrometry (MRM-MS) assays for quantitative proteomics

Protein

Peptide

Sequence

LOD

LOQ

Endogenous Level

Natriuretic peptides B

bi0096

MVLYTLR

0.082

0.246

0

 

bi0097

M(ox)VLYTLR

0.098

0.294

0

 

bi0098

ISSSSGLGCK

0.074

0.223

0

 

bi0099

MVQGSGCFGR

0.081

0.244

0

 

bi0100

M(ox)VQGSGCFGR

0.216

0.647

0

CRP

bi0090

ESDTSYVSLK

1.454

4.361

1.072

 

bi0092

GYSIFSYATK

1.949

5.847

1.838

IL33

bi0120

DNHLALIK

0.606

1.818

0

 

bi0121

TDPGVFIGVK

0.172

0.515

0

 

bi0122

DFWLHANNK

0.271

0.812

0

 

bi0123

VLLSYYESQHPSNESGDGVDGK

0.274

0.822

0

MCP1

bi0124

WVQDSMDHLDK

4.523

13.568

0

MPO

bi0102

IPCFLAGDTR

0.287

0.862

0

 

bi0104

IANVFTNAFR

0.329

0.988

0

MRP14

bi0118

LTWASHEK

0.397

1.190

0

 

bi0119

LGHPDTLNQGEFK

0.475

1.425

0.283

sCD40L

bi0108

SQFEGFVK

0.203

0.609

0

 

bi0105

TTSVLQWAEK

0.202

0.606

0

 

bi0106

EASSQAPFIASLCLK

0.086

0.257

0

 

bi0109

SLSLLNCEEIK

0.071

0.212

0

Troponin

bi0082

TLLLQIAK

0.088

0.265

0

 

bi0083

NITEIADLTQK

0.055

0.165

0

 

bi0084

NIDALSGMEGR

0.256

0.767

0

 

bi0086

VLAIDHLNEDQLR

0.154

0.461

0

 

bi0087

SFMPNLVPPK

0.108

0.324

0

 

bi0088

SFM(ox)PNLVPPK

0.116

0.349

0

 

bi0089

YEINVLR

0.052

0.157

0

  1. See section 4.2 for description.