Family1 | Super-family | No. of intact copies1 | Repeat A | Repeat B | Repeat C | Repeat D | Repeat E | Additional discreet loci2 | |||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
 |  |  | Total hits | No. of discreet loci | Total hits | No. of discreet loci | Total hits | No. of discreet loci | Total hits | No. of discreet loci | Total hits | No. of discreet loci |  |
Gmr1 | Gypsy | 564 | 121 | 15 | 67 | 14 | 70 | 15 | 28 | 15 | 49 | 16 | 16 |
Gmr2 | Copia | 837 | 24 | 5 | 34 | 5 | 37 | 5 | 8 | 4 | 17 | 6 | 4 |
Gmr3 | Gypsy | 867 | 88 | 12 | 72 | 10 | 87 | 13 | 15 | 8 | 33 | 12 | 28 |
Gmr4 | Gypsy | 1363 | 354 | 38 | 224 | 37 | 226 | 38 | 90 | 38 | 150 | 50 | 78 |
Gmr5 | Copia | 401 | 141 | 20 | 73 | 13 | 75 | 14 | 28 | 14 | 50 | 18 | 42 |
Gmr6 | Copia | 763 | 203 | 19 | 115 | 18 | 141 | 23 | 41 | 18 | 68 | 20 | 12 |
Gmr7 | Copia | 195 | 10 | 1 | 4 | 1 | 6 | 2 | 3 | 2 | 6 | 3 | 1 |
Gmr9 | Gypsy | 3247 | 13293 | 1561 | 9137 | 1428 | 9211 | 1543 | 2999 | 1468 | 5510 | 1890 | 3975 |
Gmr12 | Gypsy | 114 | 44 | 5 | 34 | 5 | 42 | 5 | 10 | 3 | 20 | 6 | 2 |
Gmr14 | Copia | 43 | 0 | 0 | 0 | 0 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
Gmr15 | Copia | 84 | 4 | 1 | 4 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 0 |
Gmr16 | Copia | 116 | 6 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Gmr17 | Gypsy | 422 | 23 | 3 | 16 | 2 | 2 | 2 | 2 | 2 | 4 | 2 | 1 |
Gmr18 | Copia | 204 | 10 | 2 | 14 | 2 | 16 | 2 | 5 | 2 | 8 | 3 | 1 |
Gmr19 | Gypsy | 581 | 214 | 27 | 113 | 24 | 114 | 22 | 46 | 20 | 76 | 28 | 19 |
Gmr21 | Gypsy | 157 | 85 | 12 | 89 | 14 | 76 | 13 | 34 | 15 | 59 | 18 | 6 |
Gmr22 | Copia | 119 | 3 | 1 | 4 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 0 |
Gmr24 | Copia | 79 | 2 | 1 | 5 | 1 | 4 | 1 | 0 | 0 | 2 | 1 | 0 |
Gmr25 | Gypsy | 307 | 111 | 13 | 61 | 11 | 71 | 13 | 28 | 10 | 48 | 13 | 21 |
Gmr28 | Copia | 100 | 7 | 1 | 14 | 1 | 15 | 1 | 2 | 1 | 4 | 1 | 0 |
Gmr34 | Gypsy | 120 | 2 | 1 | 4 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 9 |
Gmr35 | Copia | 95 | 9 | 1 | 8 | 1 | 11 | 2 | 2 | 1 | 4 | 1 | 0 |
Gmr37 | Copia | 255 | 35 | 4 | 50 | 5 | 51 | 5 | 9 | 4 | 22 | 10 | 5 |
Gmr51 | Gypsy | 27 | 4 | 1 | 0 | 0 | 0 | 0 | 1 | 1 | 3 | 2 | 0 |
Gmr52 | Gypsy | 20 | 6 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Gmr59 | Gypsy | 31 | 0 | 0 | 0 | 0 | 3 | 1 | 0 | 0 | 0 | 0 | 0 |
Gmr68 | Copia | 12 | 13 | 1 | 6 | 1 | 7 | 1 | 3 | 1 | 6 | 2 | 0 |
Gmr75 | Gypsy | 17 | 9 | 2 | 6 | 2 | 5 | 2 | 4 | 2 | 6 | 2 | 0 |
Gmr79 | Gypsy | 49 | 3 | 1 | 0 | 0 | 2 | 1 | 0 | 0 | 0 | 0 | 0 |
Gmr80 | Gypsy | 6 | 12 | 1 | 5 | 1 | 7 | 1 | 2 | 1 | 4 | 1 | 0 |
Gmr90 | Copia | 10 | 9 | 1 | 4 | 1 | 5 | 1 | 4 | 1 | 5 | 1 | 0 |
Gmr110 | Gypsy | 6 | 0 | 0 | 0 | 0 | 2 | 1 | 0 | 0 | 0 | 0 | 0 |
Gmr123 | Gypsy | 3 | 0 | 0 | 0 | 0 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
Gmr128 | Gypsy | 5 | 10 | 2 | 7 | 2 | 9 | 2 | 5 | 2 | 8 | 2 | 0 |
Gmr139 | Gypsy | 88 | 28 | 4 | 26 | 4 | 14 | 4 | 5 | 4 | 11 | 4 | 12 |
Gmr146 | Gypsy | 3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 1 | 0 |
Gmr163 | Gypsy | 3 | 1 | 1 | 5 | 1 | 6 | 1 | 2 | 1 | 4 | 1 | 0 |
Gmr169 | Gypsy | 18 | 12 | 1 | 5 | 1 | 8 | 2 | 4 | 3 | 10 | 4 | 4 |
Gmr190 | Copia | 21 | 12 | 1 | 5 | 1 | 7 | 1 | 3 | 2 | 7 | 2 | 0 |
Gmr192 | Gypsy | 3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 1 | 0 |
Gmr290 | Gypsy | 3 | 1 | 1 | 0 | 0 | 0 | 0 | 1 | 1 | 0 | 0 | 0 |
Gmr459 | Gypsy | 10 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 1 | 0 |
Gmr522 | Gypsy | 17 | 6 | 1 | 6 | 1 | 0 | 0 | 1 | 1 | 2 | 1 | 0 |
Others2 | Multi | ND | ND | ND | ND | ND | ND | ND | ND | ND | ND | ND | 17 |
Unknown | NA | NA | ND | ND | ND | ND | ND | ND | ND | ND | ND | ND | 75 |
Total | Â | 11385 | 14915 | 1763 | 10217 | 1610 | 10335 | 1742 | 3388 | 1648 | 6205 | 2126 | 4328 |