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Table 2 Comparison of Hamming seeds, BLAST, and blastZ

From: Genome-scale NCRNA homology search using a Hamming distance-based filtration strategy

  HD seed BLAST BlastZ
Sensitivity 0.6 0.07 0.17
FP rate 0.0009 0.0011 0.0054
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BMC Bioinformatics

ISSN: 1471-2105

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