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Table 2 Comparison of Hamming seeds, BLAST, and blastZ

From: Genome-scale NCRNA homology search using a Hamming distance-based filtration strategy

 

HD seed

BLAST

BlastZ

Sensitivity

0.6

0.07

0.17

FP rate

0.0009

0.0011

0.0054

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BMC Bioinformatics

ISSN: 1471-2105

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