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Table 5 Relative RMS (root-mean-squared) error

From: Multi-dimensional characterization of electrostatic surface potential computation on graphics processors

Structure

Version

Relative RMSE

H helix myoglobin

CPU with HCP

0.215821

 

GPU

0.000030

 

GPU with HCP

0.236093

nuclesome core particle

CPU with HCP

0.022950

 

GPU

0.000062

 

GPU with HCP

0.022853

chaperonin GroEL, 2eu1

CPU with HCP

0.008799

 

GPU

0.000042

 

GPU with HCP

0.008816

virus capsid

CPU with HCP

0.015376

 

GPU

0.000173

 

GPU with HCP

0.015273

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BMC Bioinformatics

ISSN: 1471-2105

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