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Table 1 Accuracy

From: Challenges in estimating percent inclusion of alternatively spliced junctions from RNA-seq data

Error

Native

Gaussian

Mixture

Bootstrap

MISO

Cufflinks

V

28.5

24.1

27.2

24.2

30.9

43.7

S

12.90

15.26

15.87

15.22

9.87

12.65

D KL

264

102

94.2

92.0

220

1115

E 1/2

9.34

7.08

6.62

6.65

9.28

14.65

  1. Comparison of error between different PSI estimation methods with respect to RT-PCR target. The best methods with lowest error in each row are bolded. Robust Mixture model is abbreviated to "Mixture".
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BMC Bioinformatics

ISSN: 1471-2105

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