From: A systematic comparison of the MetaCyc and KEGG pathway databases
Status | Pathway class | Class size | Links | p-value |
---|---|---|---|---|
Enriched | Amino Acids Biosynthesis | 112 | \frac{186}{260} | 1.4 × 10^{−20} |
Enriched | Individual Amino Acids Biosynthesis | 99 | \frac{174}{244} | 4.0 × 10^{−19} |
Enriched | Amino Acids Degradation | 118 | \frac{222}{326} | 2.0 × 10^{−17} |
Enriched | Purine Nucleotide Biosynthesis | 19 | \frac{46}{56} | 3.2 × 10^{−10} |
Enriched | Generation Of Precursor Metabolites And Energy | 162 | \frac{170}{304} | 2.6 × 10^{−9} |
Enriched | C1 Compounds Utilization And Assimilation | 28 | \frac{75}{102} | 9.3 × 10^{−9} |
Enriched | Autotrophic CO_{2} Fixation | 7 | \frac{47}{57} | 1.3 × 10^{−7} |
Enriched | CO_{2} Fixation | 9 | \frac{48}{59} | 2.8 × 10^{−7} |
Enriched | Vitamins Biosynthesis | 68 | \frac{128}{223} | 1.4 × 10^{−6} |
Enriched | Sugar Derivatives Degradation | 42 | \frac{109}{162} | 3.8 × 10^{−6} |
Enriched | Sugar Alcohols Degradation | 12 | \frac{54}{68} | 6.0 × 10^{−6} |
Enriched | Amines And Polyamines Biosynthesis | 37 | \frac{57}{74} | 6.9 × 10^{−6} |
Enriched | Carboxylates Degradation | 44 | \frac{82}{132} | 1.0 × 10^{−5} |
Enriched | Sugars Degradation | 51 | \frac{108}{162} | 1.5 × 10^{−5} |
Enriched | NAD Biosynthesis | 8 | \frac{23}{23} | 1.6 × 10^{−5} |
Enriched | Fermentation | 46 | \frac{75}{106} | 3.6 × 10^{−5} |
Enriched | Nucleosides And Nucleotides Biosynthesis | 35 | \frac{69}{128} | 6.8 × 10^{−5} |
Enriched | Nucleosides And Nucleotides Degradation | 29 | \frac{64}{90} | 1.4 × 10^{−4} |
Enriched | Purine Nucleotide Salvage | 13 | \frac{26}{28} | 1.7 × 10^{−4} |
Enriched | Arginine Degradation | 15 | \frac{35}{42} | 4.6 × 10^{−4} |
Enriched | Purine Nucleotide De Novo Biosynthesis | 6 | \frac{22}{30} | 4.9 × 10^{−4} |
Enriched | Mandelates Degradation | 2 | \frac{18}{18} | 9.9 × 10^{−4} |
Enriched | Gluconeogenesis | 2 | \frac{23}{28} | 1.1 × 10^{−3} |
Enriched | Glycolysis | 6 | \frac{27}{30} | 2.0 × 10^{−3} |
Enriched | NAD Metabolism | 11 | \frac{28}{33} | 2.1 × 10^{−3} |
Enriched | Geranylgeranyldiphosphate Biosynthesis | 3 | \frac{18}{18} | 2.3 × 10^{−3} |
Enriched | Catechol Degradation | 7 | \frac{17}{17} | 2.3 × 10^{−3} |
Enriched | Methionine Biosynthesis | 13 | \frac{29}{34} | 4.0 × 10^{−3} |
Enriched | Photosynthesis | 5 | \frac{24}{30} | 4.0 × 10^{−3} |
Enriched | Pyrimidine Nucleotide Biosynthesis | 8 | \frac{36}{53} | 5.7 × 10^{−3} |
Enriched | Toluenes Degradation | 13 | \frac{35}{46} | 7.2 × 10^{−3} |
Enriched | Glutamate Degradation | 10 | \frac{28}{35} | 1.5 × 10^{−2} |
Enriched | Formaldehyde Assimilation | 3 | \frac{24}{28} | 1.6 × 10^{−2} |
Enriched | Alcohols Degradation | 17 | \frac{24}{30} | 1.6 × 10^{−2} |
Enriched | Urate Degradation | 2 | \frac{17}{18} | 2.4 × 10^{−2} |
Enriched | Cobalamin Biosynthesis | 9 | \frac{35}{46} | 2.5 × 10^{−2} |
Depleted | Secondary Metabolites Biosynthesis | 460 | \frac{579}{1896} | 3.8 × 10^{−35} |
Depleted | Glucosinolates Biosynthesis | 9 | \frac{4}{104} | 2.0 × 10^{−17} |
Depleted | Biosynthesis | 1182 | \frac{1459}{4215} | 2.3 × 10^{−16} |
Depleted | Nitrogen Containing Glucosides Biosynthesis | 13 | \frac{11}{125} | 8.0 × 10^{−15} |
Depleted | Hormones Degradation | 24 | \frac{12}{124} | 2.7 × 10^{−13} |
Depleted | Polymeric Compounds Degradation | 35 | \frac{17}{136} | 3.5 × 10^{−12} |
Depleted | Polysaccharides Degradation | 33 | \frac{17}{127} | 2.0 × 10^{−10} |
Depleted | Steroids Degradation | 8 | \frac{2}{46} | 4.2 × 10^{−6} |
Depleted | Polyketides Biosynthesis | 13 | \frac{6}{62} | 1.5 × 10^{−5} |
Depleted | Glucosinolates Degradation | 4 | \frac{0}{30} | 7.0 × 10^{−5} |
Depleted | Cholesterol Degradation | 4 | \frac{1}{33} | 3.3 × 10^{−4} |
Depleted | Fatty Acid Biosynthesis | 49 | \frac{20}{354} | 3.4 × 10^{−4} |
Depleted | Nitrogen Containing Secondary Compounds Degradation | 18 | \frac{13}{77} | 1.0 × 10^{−3} |
Depleted | Terpenoids Biosynthesis | 127 | \frac{176}{530} | 1.2 × 10^{−3} |
Depleted | Plant Hormones Degradation | 15 | \frac{7}{55} | 1.6 × 10^{−3} |
Depleted | Sesquiterpenoids Biosynthesis | 32 | \frac{25}{114} | 1.6 × 10^{−3} |
Depleted | Chlorotoluene Degradation | 5 | \frac{0}{24} | 2.3 × 10^{−3} |
Depleted | Auxins Degradation | 8 | \frac{0}{23} | 4.1 × 10^{−3} |
Depleted | Apocarotenoids Biosynthesis | 4 | \frac{0}{20} | 2.4 × 10^{−2} |
Depleted | Lignans Biosynthesis | 5 | \frac{0}{20} | 2.4 × 10^{−2} |