Table 11 MetaCyc pathway classes that are significantly enriched or depleted for reactions with links to KEGG

Enriched

Amino Acids Biosynthesis

112

$\frac{186}{260}$

1.4 × 10⁻²⁰

Enriched

Individual Amino Acids Biosynthesis

99

$\frac{174}{244}$

4.0 × 10⁻¹⁹

Enriched

Amino Acids Degradation

118

$\frac{222}{326}$

2.0 × 10⁻¹⁷

Enriched

Purine Nucleotide Biosynthesis

19

$\frac{46}{56}$

3.2 × 10⁻¹⁰

Enriched

Generation Of Precursor Metabolites And Energy

162

$\frac{170}{304}$

2.6 × 10⁻⁹

Enriched

C1 Compounds Utilization And Assimilation

28

$\frac{75}{102}$

9.3 × 10⁻⁹

Enriched

Autotrophic CO₂ Fixation

7

$\frac{47}{57}$

1.3 × 10⁻⁷

Enriched

CO₂ Fixation

9

$\frac{48}{59}$

2.8 × 10⁻⁷

Enriched

Vitamins Biosynthesis

68

$\frac{128}{223}$

1.4 × 10⁻⁶

Enriched

Sugar Derivatives Degradation

42

$\frac{109}{162}$

3.8 × 10⁻⁶

Enriched

Sugar Alcohols Degradation

12

$\frac{54}{68}$

6.0 × 10⁻⁶

Enriched

Amines And Polyamines Biosynthesis

37

$\frac{57}{74}$

6.9 × 10⁻⁶

Enriched

Carboxylates Degradation

44

$\frac{82}{132}$

1.0 × 10⁻⁵

Enriched

Sugars Degradation

51

$\frac{108}{162}$

1.5 × 10⁻⁵

Enriched

NAD Biosynthesis

8

$\frac{23}{23}$

1.6 × 10⁻⁵

Enriched

Fermentation

46

$\frac{75}{106}$

3.6 × 10⁻⁵

Enriched

Nucleosides And Nucleotides Biosynthesis

35

$\frac{69}{128}$

6.8 × 10⁻⁵

Enriched

Nucleosides And Nucleotides Degradation

29

$\frac{64}{90}$

1.4 × 10⁻⁴

Enriched

Purine Nucleotide Salvage

13

$\frac{26}{28}$

1.7 × 10⁻⁴

Enriched

Arginine Degradation

15

$\frac{35}{42}$

4.6 × 10⁻⁴

Enriched

Purine Nucleotide De Novo Biosynthesis

6

$\frac{22}{30}$

4.9 × 10⁻⁴

Enriched

Mandelates Degradation

2

$\frac{18}{18}$

9.9 × 10⁻⁴

Enriched

Gluconeogenesis

2

$\frac{23}{28}$

1.1 × 10⁻³

Enriched

Glycolysis

6

$\frac{27}{30}$

2.0 × 10⁻³

Enriched

NAD Metabolism

11

$\frac{28}{33}$

2.1 × 10⁻³

Enriched

Geranylgeranyldiphosphate Biosynthesis

3

$\frac{18}{18}$

2.3 × 10⁻³

Enriched

Catechol Degradation

7

$\frac{17}{17}$

2.3 × 10⁻³

Enriched

Methionine Biosynthesis

13

$\frac{29}{34}$

4.0 × 10⁻³

Enriched

Photosynthesis

5

$\frac{24}{30}$

4.0 × 10⁻³

Enriched

Pyrimidine Nucleotide Biosynthesis

8

$\frac{36}{53}$

5.7 × 10⁻³

Enriched

Toluenes Degradation

13

$\frac{35}{46}$

7.2 × 10⁻³

Enriched

Glutamate Degradation

10

$\frac{28}{35}$

1.5 × 10⁻²

Enriched

Formaldehyde Assimilation

3

$\frac{24}{28}$

1.6 × 10⁻²

Enriched

Alcohols Degradation

17

$\frac{24}{30}$

1.6 × 10⁻²

Enriched

Urate Degradation

2

$\frac{17}{18}$

2.4 × 10⁻²

Enriched

Cobalamin Biosynthesis

9

$\frac{35}{46}$

2.5 × 10⁻²

Depleted

Secondary Metabolites Biosynthesis

460

$\frac{579}{1896}$

3.8 × 10⁻³⁵

Depleted

Glucosinolates Biosynthesis

9

$\frac{4}{104}$

2.0 × 10⁻¹⁷

Depleted

Biosynthesis

1182

$\frac{1459}{4215}$

2.3 × 10⁻¹⁶

Depleted

Nitrogen Containing Glucosides Biosynthesis

13

$\frac{11}{125}$

8.0 × 10⁻¹⁵

Depleted

Hormones Degradation

24

$\frac{12}{124}$

2.7 × 10⁻¹³

Depleted

Polymeric Compounds Degradation

35

$\frac{17}{136}$

3.5 × 10⁻¹²

Depleted

Polysaccharides Degradation

33

$\frac{17}{127}$

2.0 × 10⁻¹⁰

Depleted

Steroids Degradation

8

$\frac{2}{46}$

4.2 × 10⁻⁶

Depleted

Polyketides Biosynthesis

13

$\frac{6}{62}$

1.5 × 10⁻⁵

Depleted

Glucosinolates Degradation

4

$\frac{0}{30}$

7.0 × 10⁻⁵

Depleted

Cholesterol Degradation

4

$\frac{1}{33}$

3.3 × 10⁻⁴

Depleted

Fatty Acid Biosynthesis

49

$\frac{20}{354}$

3.4 × 10⁻⁴

Depleted

Nitrogen Containing Secondary Compounds Degradation

18

$\frac{13}{77}$

1.0 × 10⁻³

Depleted

Terpenoids Biosynthesis

127

$\frac{176}{530}$

1.2 × 10⁻³

Depleted

Plant Hormones Degradation

15

$\frac{7}{55}$

1.6 × 10⁻³

Depleted

Sesquiterpenoids Biosynthesis

32

$\frac{25}{114}$

1.6 × 10⁻³

Depleted

Chlorotoluene Degradation

5

$\frac{0}{24}$

2.3 × 10⁻³

Depleted

Auxins Degradation

8

$\frac{0}{23}$

4.1 × 10⁻³

Depleted

Apocarotenoids Biosynthesis

4

$\frac{0}{20}$

2.4 × 10⁻²

Depleted

Lignans Biosynthesis

5

$\frac{0}{20}$

2.4 × 10⁻²