Ensemble-based prediction of RNA secondary structures

BMC Bioinformatics

Table 2 Spearman correlation for pairs of prediction algorithms

	AveRNA	BL-FR^∗	BL^∗	CG^∗	DIM-CG	NOM-CG	CONTRAfold2.0	CentroidFold	MaxExpect	CONTRAfold1.1
AveRNA
BL-FR*	0.942
BL*	0.886	0.857
CG*	0.814	0.774	0.821
DIM-CG	0.828	0.764	0.819	0.897
NOM-CG	0.788	0.747	0.801	0.899	0.877
CONTRAfold2.0	0.769	0.707	0.716	0.733	0.749	0.722
CentroidFold	0.758	0.698	0.714	0.715	0.741	0.715	0.937
MaxExpect	0.749	0.689	0.730	0.732	0.769	0.751	0.755	0.759
CONTRAfold1.1	0.720	0.660	0.685	0.707	0.733	0.719	0.799	0.818	0.780
T99	0.703	0.665	0.691	0.687	0.697	0.728	0.670	0.684	0.749	0.691

Spearman correlation coefficients for the F-measure values of of pairs of prediction algorithms over the S-STRAND2 dataset.

ISSN: 1471-2105