Table 5 Discrepant annotations between RAST and consensus annotation
From: A semi-automated genome annotation comparison and integration scheme
Gene ID | RAST annotation | Consensus annotation | Reliable annotation | Bioinformatic evidence |
|---|---|---|---|---|
44 | hypothetical protein | membrane transport family protein | consensus | Pfam, TIGRfam, BLAST, TMHMM |
1333 | protein of unknown function DUF481 | Putative salt-induced outer membrane protein | consensus | BLAST |
77 | hypothetical protein | tat (twin-arginine translocation) pathway signal sequence domain protein | neither | NADH dehydrogenase, FAD-containing subunit (BLAST) |
2081 | conserved hypothetical protein | Methyltransferase domain. | neither | Tellurite resistance protein TehB (pFam) |
982 | histidine kinase | bacterial extracellular solute-binding proteins, family 3 family protein | RAST | two-component sensor histidine kinase (BLAST) |
1900 | hypothetical protein | N- methylation | RAST | hypothetical protein (BLAST) |
183 | conserved hypothetical protein | putative membrane protein | not enough evidence | Â |
212 | conserved hypothetical protein | transcriptional regulator, Spx/MgsR family | not enough evidence | Â |