Table 1 Applied scores for local clues
From: bioNerDS: exploring bioinformatics’ database and software use through literature mining
Pattern name | Description | Score |
|---|---|---|
Dictionary | Matches dictionary | +5.50 |
Title | Matches title pattern | +4.00 |
Enum | Is part of a known resource enumeration | +3.00 |
Hearst | Is part of a Hearst pattern | +4.00 |
“Good” Head | Associated with a positive head term | +2.00 |
Version | Followed by a version number | +3.00 |
Reference | Followed by a reference | +1.00 |
Hyper-Link | Followed by a hyper-link or URL | +1.50 |
Mixed Case | Is MiXeD CaSe | +1.00 |
Upper Case | Is UPPER CASE | +0.50 |
Bioconductor | Matches Bioconductor dictionary | -1.75 |
Dictionary Word | Is an English dictionary word | -4.00 |
Known Acronym | Is a known bio-acronym | -15.00 |
Negative Head | Associated with a negative head term | -15.00 |
Lower Case | Is lower case | -1.00 |
Partial-Word | Is only a part of a word | -15.00 |
Compound Factor | Term fires multiple positive clues | +0.50 |
Weak | Associated with a weak identifier | +0.50 |