Table 2 Comparison of running time per gene for various deconvolution methods (on a machine with a 2.4 GHz Intel Xeon processor, and 4 GB RAM)
From: Deconvolution of gene expression from cell populations across the C. eleganslineage
Method | time (seconds) |
|---|---|
naïve pseudoinverse | 0.01 |
EP | 0.5 |
constrained pseudoinverse | 19 |
constrained pseudoinverse with correlation | 23 |
sampling | 583 |