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Table 2 Comparison of running time per gene for various deconvolution methods (on a machine with a 2.4 GHz Intel Xeon processor, and 4 GB RAM)

From: Deconvolution of gene expression from cell populations across the C. eleganslineage

Method time (seconds)
naïve pseudoinverse 0.01
EP 0.5
constrained pseudoinverse 19
constrained pseudoinverse with correlation 23
sampling 583