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Table 3 Clustering of the UniProt database

From: kClust: fast and sensitive clustering of large protein sequence databases

 

#Clusters

Time

BLAST (estimated)

?

80 y

kClust 30

5 663 658

13 d 12 h

UCLUST 30

6 636 076

3 d 5 h

  1. Results for the clustering of the UniProt database, containing 36 042 779 sequences. BLAST running time is estimated.
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BMC Bioinformatics

ISSN: 1471-2105

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