Table 6 Prediction of regulations between the set of genes and when using only gene expression data as descriptors
From: Learning a Markov Logic network for supervised gene regulatory network inference
Bagged MLNs | ||||
|---|---|---|---|---|
λ | AUC-ROC | AUC-PR | ||
50 | 61.5 | 2.4 | ||
100 | 62.5 | 2.5 | ||
500 | 59.5 | 2.3 | ||
750 | 64.6 | 2.5 | ||
1000 | 64.9 | 2.5 | ||
5000 | 64.0 | 2.5 | ||
10000 | 62.7 | 2.4 | ||
Bagged pairwise SVMs | ||||
C | Pairwise sum | Sum | ||
AUC-ROC | AUC-PR | AUC-ROC | AUC-PR | |
0.001 | 60.2 | 3.0 | 62.8 | 3.9 |
0.01 | 60.2 | 3.0 | 62.8 | 3.9 |
0.1 | 60.2 | 3.0 | 62.8 | 3.9 |
1 | 62.8 | 4.2 | 64.8 | 6.4 |
10 | 60.9 | 4.8 | 64.0 | 6.1 |
100 | 60.9 | 4.8 | 64.0 | 6.1 |
1000 | 60.9 | 4.8 | 64.0 | 6.1 |