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Table 6 Prediction of regulations between the set of genes G A and G B when using only gene expression data as descriptors

From: Learning a Markov Logic network for supervised gene regulatory network inference

Bagged MLNs
λ AUC-ROC AUC-PR
50   61.5   2.4
100   62.5   2.5
500   59.5   2.3
750   64.6   2.5
1000   64.9   2.5
5000   64.0   2.5
10000   62.7   2.4
Bagged pairwise SVMs
C Pairwise sum Sum
  AUC-ROC AUC-PR AUC-ROC AUC-PR
0.001 60.2 3.0 62.8 3.9
0.01 60.2 3.0 62.8 3.9
0.1 60.2 3.0 62.8 3.9
1 62.8 4.2 64.8 6.4
10 60.9 4.8 64.0 6.1
100 60.9 4.8 64.0 6.1
1000 60.9 4.8 64.0 6.1
  1. This table presents the results obtained with bagged MLNs and bagged pairwise SVMs on the third task when using only gene expression data as gene descriptors.