Figure 5From: A Hidden Markov Model for identifying essential and growth-defect regions in bacterial genomes from transposon insertion sequencing dataMean insertion density and read counts for regions. Scatter plot of mean non-zero read counts and mean insertion frequency for the regions identified by the HMM. Regions are defined consecutive sites belonging to the same state, and are colored according to their states (Essential regions: green circles; Growth-Defect regions: yellow triangle, Non-Essential: red cross, and Growth-Advantage: blue x’s).Back to article page