Figure 6
From: A scalable, knowledge-based analysis framework for genetic association studies
Tuning probabilities and speedup for Scenario 1 datasets. The proposal probabilities used in Algorithm 1 for the root were summarized for the Scenario 1 datasets. Here, the symmetric graph outperformed the informative graph. All of the PEAK algorithm configurations offered considerable speedup over the M-H algorithm (values shown on right axis). Note that the whiskers and outliers were not drawn on the box plots.