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Table 6 Tree generation and distance matrix computation time (seconds) for SUNPLIN-C++ using different randomly generated phylogenies

From: SUNPLIN: Simulation with Uncertainty for Phylogenetic Investigations

  Tree expansion Distance matrix
|T | for |T | for |T |+|S|
100 0.25 1.98
250 0.32 6.00
500 0.44 14.45
750 0.56 28.12
1,000 0.67 44.80
  1. Time in seconds for generating m = 1,000 expanded trees and to calculate distance matrices. The input trees contain |T | = (100, …, 1,000) species (randomly generated phylogenies) and each one is expanded with the insertion of |S| = 100 species.