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Table 10 An example confusion matrix predicting TC class 3.A.1 members

From: Transferring functional annotations of membrane transporters on the basis of sequence similarity and sequence motifs

  Predicted class
3.A.1 Other classes
Actual Class 3.A.1 TP FN
  Other classes FP TN
  1. A confusion matrix corresponding to our method of calculating accuracy measures for the TC and substrate classifications. TPs are members of the actual class correctly classified to the same class from the other organism; Members are considered FNs if they were classified to another class. FPs are members of the other classes that were predicted to belong to the actual. TNs are members of other classes predicted to belong to other classes.