| |
Ec- At
|
Ec- Sc
|
Sc- At
|
|---|
|
1e-20
|
1e-16
|
1e-12
|
1e-8
|
1e-4
|
1e-20
|
1e-16
|
1e-12
|
1e-8
|
1e-4
|
1e-20
|
1e-16
|
1e-12
|
1e-8
|
1e-4
|
|---|
|
Precision [%]
|
73.3
|
85.6
|
86.7
|
90.0
|
90.8
|
78.6
|
78.6
|
81.6
|
86.7
|
92.9
|
84.7
|
85.4
|
85.4
|
97.5
|
93.7
|
|
Recall [%]
|
73.3
|
85.6
|
86.7
|
90.0
|
92.1
|
78.6
|
78.6
|
81.6
|
86.7
|
92.9
|
84.7
|
85.4
|
85.4
|
97.5
|
96.0
|
|
F-measure[%]
|
73.3
|
85.6
|
86.7
|
90.0
|
91.4
|
78.6
|
78.6
|
81.6
|
86.7
|
92.9
|
84.7
|
85.4
|
85.4
|
97.5
|
94.7
|
|
Unclassified [%]
|
76.7
|
52.2
|
40.0
|
33.3
|
17.8
|
21.4
|
21.4
|
18.4
|
13.3
|
7.1
|
15.3
|
14.6
|
14.6
|
2.5
|
2.5
|
- HMMER prediction results (sequence E-values) under the given E-value confidence thresholds. The results were normalized by the size of the reference database (see text). HMMER gave a better accuracy under loose thresholds compared to BLAST.
