| |
Ec- At
|
Ec- Sc
|
Sc- At
|
|---|
|
1e-20
|
1e-16
|
1e-12
|
1e-8
|
1e-4
|
1e-20
|
1e-16
|
1e-12
|
1e-8
|
1e-4
|
1e-20
|
1e-16
|
1e-12
|
1e-8
|
1e-4
|
|---|
|
Precision [%]
|
51.4
|
58.3
|
69.1
|
66.0
|
57.7
|
85.2
|
77.0
|
72.7
|
71.3
|
70.3
|
99.3
|
90.4
|
76.3
|
71.7
|
59.9
|
|
Recall [%]
|
51.4
|
58.3
|
100.0
|
93.5
|
88.7
|
83.8
|
82.4
|
82.3
|
78.4
|
74.6
|
96.2
|
95.3
|
93.4
|
90.1
|
86.0
|
|
F-measure[%]
|
51.4
|
58.3
|
75.9
|
70.3
|
61.9
|
81.9
|
75.5
|
73.3
|
71.1
|
69.0
|
97.2
|
91.4
|
78.6
|
75.4
|
68.2
|
|
Unclassified [%]
|
93.1
|
88.9
|
83.3
|
79.2
|
65.3
|
69.4
|
61.1
|
55.6
|
51.4
|
47.2
|
45.7
|
44.3
|
41.4
|
34.3
|
17.1
|
- HMMER prediction results for substrate families. The results were normalized by the size of the reference database (see text). HMMER gave a slightly higher prediction accuracy than BLAST in the Ec-Sc analysis.
