Table 5 Summary of the recall rate, precision and F-measure for QuasQ, ShoRAH, QuRe, ViSpA, ViSpA (using ShoRAH corrected reads), QuasiRecomb (no recombination) and QuasiRecomb (with recombination) in reconstruction of the subtype B HIV-1 pol gene quasispecies
| Â | Recall | Precision | F-measure |
|---|---|---|---|
QuasQ | 0.700 | 1.000 | 0.824 |
ShoRAH | 0.900 | 0.153 | 0.261 |
QuRe | 0.600 | 0.154 | 0.245 |
Vispa | 0.600 | 0.005 | 0.010 |
Vispa (Corrected) | 0.400 | 0.250 | 0.308 |
QuasiRecomb (No recomb) | 0.500 | 0.004 | 0.008 |
QuasiRecomb (With recomb) | 0.500 | 0.001 | 0.002 |