Alignment and count method | Exact test | Log ratio | T-test-log |
---|---|---|---|
STAR-countOverlaps | 0.917 | 0.9191 | 0.8845 |
tophat-countOverlaps | 0.9162 | 0.9183 | 0.8837 |
STAR-htseq | 0.9119 | 0.916 | 0.8797 |
tophat-htseq | 0.9109 | 0.9151 | 0.8784 |
RSEM-TPM | 0.9264 | 0.9342 | 0.8964 |
RSEM-posteriorTPM | 0.9273 | 0.9355 | 0.897 |
RSEM-count | 0.9295 | 0.9328 | 0.8959 |
RSEM-posteriorCount | 0.9303 | 0.9338 | 0.8965 |