BMC Bioinformatics

Table 2 Results after train and test on the two different input coding schemes.

From: Accurate prediction of protein enzymatic class by N-to-1 Neural Networks

		MSA				MSA+SS
	Spec	Sens	MCC	FPR	Spec	Sens	MCC	FPR
Oxidoreductase	0.90	0.89	0.87	0.02	0.88	0.88	0.86	0.02
Transferase	0.90	0.89	0.84	0.05	0.90	0.87	0.82	0.06
Hydrolase	0.89	0.92	0.84	0.07	0.87	0.91	0.82	0.08
Lyase	0.91	0.84	0.87	0.00	0.89	0.82	0.85	0.01
Isomerase	0.81	0.72	0.76	0.01	0.84	0.69	0.76	0.00
Ligase	0.89	0.85	0.86	0.01	0.87	0.84	0.85	0.01
GC	0.86				0.84
Q	0.96				0.96

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ISSN: 1471-2105

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