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Table 3 Node counts per graph coarsening iteration.

From: An efficient and scalable graph modeling approach for capturing information at different levels in next generation sequencing reads

Iteration

0

1

2

3

4

5

6

5x Illumina

1345428

1088207

1001256

982272

978758

n/a

n/a

15x Illumina

4036305

3030374

2551815

2365898

2296455

2270702

2260151

25x Illumina

6727169

4941413

4073476

3685025

3494872

3405273

3363256

454 Reads

320 000

182 532

113 382

71862

45991

29846

20318

Bioreactor

9641139

5419384

4771806

419376

3690376

3248944

2866551

Iteration

7

8

9

10

11

12

13

5x Illumina

n/a

n/a

n/a

n/a

n/a

n/a

n/a

15x Illumina

n/a

n/a

n/a

n/a

n/a

n/a

n/a

25x Illumina

3342376

3330806

n/a

n/a

n/a

n/a

n/a

454 Reads

15592

13747

13215

13071

13026

n/a

n/a

Bioreactor

2535701

2248986

2002686

1792359

1613895

1463064

1334821

Iteration

14

15

16

17

18

19

20

5x Illumina

n/a

n/a

n/a

n/a

n/a

n/a

n/a

15x Illumina

n/a

n/a

n/a

n/a

n/a

n/a

n/a

25x Illumina

n/a

n/a

n/a

n/a

n/a

n/a

n/a

454 Reads

n/a

n/a

n/a

n/a

n/a

n/a

n/a

Bioreactor

1226384

1134971

1058853

996532

94591

907599

877863

Iteration

21

22

23

24

25

26

27

5x Illumina

n/a

n/a

n/a

n/a

n/a

n/a

n/a

15x Illumina

n/a

n/a

n/a

n/a

n/a

n/a

n/a

25x Illumina

n/a

n/a

n/a

n/a

n/a

n/a

n/a

454 Reads

n/a

n/a

n/a

n/a

n/a

n/a

n/a

Bioreactor

855983

840179

828999

821065

815434

811363

n/a