Protein function prediction by collective classification with explicit and implicit edges in protein-protein interaction networks

Table 6 The effect of the number of BLAST-inferred edges k (Dataset A: S.cerevisiae)

parameter k	molecular function		biological process		cellular component
	1st	2nd	1st	2nd	1st	2nd
Origin	1.083	0.136	0.587	0.190	0.923	0.408
k=1	1.439	0.219	0.689	0.190	1.010	0.429
k=5	1.703	0.250	0.818	0.239	1.174	0.493
k =10	1.630	0.265	0.786	0.206	1.225	0.467
k =15	1.615	0.239	0.754	0.224	1.130	0.449

ISSN: 1471-2105