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Table 2 Filtered experimental data from cell line H929

From: Towards the integration, annotation and association of historical microarray experiments with RNA-seq

Gene Name Gene ID Transcript ID RNA-Seq Transcript Expression (FPKM) RNA-Seq Gene Expression (FPKM) Representative Affymetrix Probe set Id Chromosome Affymetrix Expression
CCND1 ENSG00000110092 ENST00000539241 19.5901 42.7301 208712_at chr11q13.2 279.6
CCND1 ENSG00000110092 CUFF.2094.1 15.7855 42.7301 208712_at chr11q13.2 279.6
CCND1 ENSG00000110092 ENST00000227507 7.35445 42.7301 208712_at chr11q13.2 279.6
CCND3 ENSG00000112576 ENST00000372991 43.8105 43.8105 1562028_at chr6p21.1 228.4
DKK1 ENSG00000107984 ENST00000373970 0.765215 1.24334 204602_at chr10q21.1 521.7
DKK1 ENSG00000107984 CUFF.403.1 0.478122 1.24334 204602_at chr10q21.1 521.7
FGFR3 ENSG00000068078 ENST00000260795 25.4733 48.3278 204380_s_at chr4p16.3 870.7
FGFR3 ENSG00000068078 CUFF.20476.3 12.4934 48.3278 204380_s_at chr4p16.3 870.7
FGFR3 ENSG00000068078 CUFF.20476.2 10.3612 48.3278 204380_s_at chr4p16.3 870.7
MAF ENSG00000178573 ENST00000393350 11.1179 23.4381 1566323_at chr16q23.1 7.1
MAF ENSG00000178573 CUFF.7714.4 7.70292 23.4381 1566323_at chr16q23.1 7.1
MAF ENSG00000178573 ENST00000326043 4.61729 23.4381 1566323_at chr16q23.1 7.1
MAFB ENSG00000204103 ENST00000373313 0.713849 0.713849 218559_s_at chr20q12 141.9
NFKB1 ENSG00000109320 CUFF.21095.8 7.80674 10.7257 209239_at chr4q24 977.1
NFKB1 ENSG00000109320 CUFF.21095.12 2.919 10.7257 209239_at chr4q24 977.1
WHSC1 ENSG00000109685 ENST00000508355 121.89 249.395 1557780_at chr4p16.3 643.5
WHSC1 ENSG00000109685 CUFF.20684.17 68.9562 249.395 1557780_at chr4p16.3 643.5
WHSC1 ENSG00000109685 ENST00000382891 58.5494 249.395 1557780_at chr4p16.3 643.5