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Table 1 The order of E-values is highly consistent to the order of number of the FP hits.

From: Efficient known ncRNA search including pseudoknots

sub-structure E-value FP hits sub-structure E-value FP hits
RF00373_part2 1.71e+03 4894 RF00373_part1 7.33e+02 2606
RF00373_part5 7.30e-02 41 RF00373_part3 3.58e-02 39
RF00373_part4 3.18e-06 39 RF00373_part6 5.29e-09 37
RF00373_part8 4.52e-09 39 RF00373_part7 3.40e-15 34