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Table 4 Cross species predictions measured by sensitivity.

From: A multispecies polyadenylation site model

 

Poly(A) sites

Models

Human

Mouse

Chicken

C.elegans

Oryza sativa

Arabidopsis

S.lycopersicum

Human

87

90

90

73

58

86

90

Mouse

87

93

90

72

60

75

90

Chicken

80

82

96

71

53

78

81

C.elegans

64

62

64

95

60

85

83

Oryza sativa

64

61

70

70

89

93

98

Arabidopsis

45

36

46

56

34

94

79

s.lycopersicum

26

26

27

45

39

52

93

  1. Sensitivity is calculated by using model from one species (indicated in the leftmost column) to predict real and false poly(A) sequences from other species (top row). The table needs not be symmetrical because poly(A) sites from different species tend to possess different characteristics according to the PCA profiles discussed above.
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BMC Bioinformatics

ISSN: 1471-2105

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