Protein Function Prediction using Text-based Features extracted from the Biomedical Literature: The CAFA Challenge

Table 1 List of evidence codes

Included evidence codes		Excluded evidence codes
EXP	Inferred from Experiment	ISS	Inferred from Sequence/Structural Similarity
IDA	Inferred from Direct Assay	ISO	Inferred from Sequence Orthology
IPI	Inferred from Physical Interaction	ISA	Inferred from Sequence Alignment
IMP	Inferred from Mutant Phenotype	ISM	Inferred from Sequence Model
IGI	Inferred from Genetic Interaction	IGC	Inferred from Genomic Context
IEP	Inferred from Expression Pattern	RCA	Reviewed Computational Analysis
IC	Inferred by Curator	IEA	Inferred from Electronic Annotation
TAS	Traceable Author Statement	NAS	Non-traceable Author Statement

The table shows which GO evidence codes were included in our dataset and which evidence codes were excluded.

ISSN: 1471-2105