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Table 1 A summary of statistics for domain-centric GO annotations.

From: A domain-centric solution to functional genomics via dcGO Predictor

  Ontology1 #Domains2 #Terms3 #Annotations4 #Density5
3,246 FA domains6 BP 1,696 6,699 106,855 9.41E-03
  MF 1,544 1,937 19,329 6.46E-03
  CC 1,490 902 30,084 2.24E-02
1,660 SF domains7 BP 1,177 8,632 127,680 1.26E-02
  MF 1,096 2,253 20,009 8.10E-03
  CC 1,054 1,134 28,636 2.40E-02
14,531 supra-domains8 BP 5,363 5,982 256,648 8.00E-03
  MF 3,972 1,472 33,355 5.70E-03
  CC 4,260 820 61,245 1.75E-02
  1. 1BP = Biological Process, MF = Molecular Function, CC = Cellular Component; 2The number of annotatable domains/supra-domains; 3The number of GO terms used to annotate; 4The total number of domain-centric GO annotations; 5Annotation density is defined as the observed (i.e., #Annotations) divided by the theoretical (a multiplication of #Domains and #Terms); 6A total of 3,246 distinct domains at SCOP family (FA) level; 7A total of 1,660 distinct domains at SCOP superfamily (SF) level; 8A total of 14,531 possible supra-domains.