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Table 2 Running time of each approach for querying one protein

From: Evaluation and integration of existing methods for computational prediction of allergens

Approaches

FAO/WHO rule 1 n* = 6

FAO/WHO rule 1 n* = 8

FAO/WHO rule2

Motif-based

SVM-based

Time (ms*)

15940

29410

58640

87

10

  1. *n means the number of exactly matched amino acids; ms means millisecond
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BMC Bioinformatics

ISSN: 1471-2105

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