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Table 2 Running time of each approach for querying one protein

From: Evaluation and integration of existing methods for computational prediction of allergens

Approaches FAO/WHO rule 1 n* = 6 FAO/WHO rule 1 n* = 8 FAO/WHO rule2 Motif-based SVM-based
Time (ms*) 15940 29410 58640 87 10
  1. *n means the number of exactly matched amino acids; ms means millisecond
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BMC Bioinformatics

ISSN: 1471-2105

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