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Table 2 Performance of CLASS with alternate exon data.

From: CLASS: constrained transcript assembly of RNA-seq reads

Set Transcripts Match_ref Match_pred Recall Precision
Paired-end reads
CLASS_IsoCEM 541 279 293 0.499 0.542
CLASS_Cufflinks 744 343 389 0.614 0.523
CLASS_Scripture 622 297 325 0.531 0.523
Single-end reads
CLASS_IsoCEM 614 286 311 0.512 0.507
CLASS_Cufflinks 666 366 436 0.655 0.655
CLASS_Scripture 568 303 361 0.542 0.636