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Table 3 Performance of four programs on the adrenal data set

From: CLASS: constrained transcript assembly of RNA-seq reads

  All Multi-exon only
Set Transcripts Recall Precision F-value Transcripts Recall Precision F-value
ENSEMBL 3280 - - - 3280 - - -
IsoCEM 21339 0.696 0.137 0.229 1951 0.535 0.765 0.630
Cufflinks 13073 0.798 0.318 0.455 3316 0.637 0.729 0.680
Scripture 11553 0.638 0.472 0.543 7573 0.539 0.561 0.550
CLASS 7394 0.745 0.800 0.772 5117 0.704 0.795 0.747
CLASS0 7062 0.744 0.786 0.764 4785 0.703 0.775 0.737