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Table 1 Performance of the three tools

From: A novel min-cost flow method for estimating transcript expression with RNA-Seq

  Precision Recall F-measure Avg. run time/gene
  (0.1, 0.2) (0.9, 0.2) (0.1, 0.2) (0.9, 0.2) (0.1, 0.2) (0.9, 0.2)  
IsoLasso 0.0183 0.2126 0.0258 0.3109 0.0214 0.2132 25 s
Cufflinks 0.0545 0.3623 0.0482 0.2931 0.0507 0.3060 40 s
Traph 0.0862 0.3729 0.0689 0.3988 0.0747 0.3665 72 s
  1. Performance of the three tools under scrutiny in the single genes scenario; precision, recall and F-measure are computed for (relative expression level difference, bitscore) {(0.1,0.2),(0.9,0.2)}