Table 1 Percentage of incorrect local ancestry inferred by DBM-Admix with and without using reference.
From: De novo inference of stratification and local admixture in sequencing studies
| Â | 2-way admix | 3-way admix | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
HapMapII | 1000Genomes | HapMapII | 1000Genomes | |||||||||||||
λ | 8 | 24 | 72 | 216 | 8 | 24 | 72 | 216 | 8 | 24 | 72 | 216 | 8 | 24 | 72 | 216 |
2 ref | 0.7 | 1.1 | 1.6 | 4.3 | 9.5 | 12.1 | 15.8 | 20.3 | 1.7 | 2.6 | 4.1 | 8.7 | 20.8 | 23.8 | 27.7 | 30.9 |
0 ref | 1.0 | 1.7 | 2.9 | 5.5 | 14.8 | 17.9 | 22.1 | 25.6 | 3.0 | 4.2 | 7.7 | 15.1 | 26.0 | 31.6 | 36.5 | 35.2 |
denovo | 2.0 | 2.4 | 3.5 | 8.4 | 15.2 | 20.6 | 21.6 | 25.6 | 2.9 | 5.4 | 9.0 | 18.1 | 25.1 | 31.8 | 38.3 | 35.3 |