Table 11 GAM-NGS's contiguity statistics on large plants datasets
From: GAM-NGS: genomic assemblies merger for next generation sequencing
Assembler | Total Length (Kbp) | Contigs | N50 (bp) |
|---|---|---|---|
Prunus persica | |||
ABySS (M) | 177,460 | 33,949 | 10,895 |
CLC (S) | 179,151 | 41,684 | 8,654 |
GAM-NGS | 184,735 | 27,445 | 13,410 |
Populus nigra | |||
CLC (M) | 339,551 | 104,432 | 6,130 |
ABySS (S) | 296,245 | 83,564 | 5,357 |
GAM-NGS | 359,795 | 78,366 | 10,018 |