BMC Bioinformatics

Table 1 Statistical significance of the comparison of ShotMCF and EM

From: Reconstruction of viral population structure from next-generation sequencing data using multicommodity flows

	Geometric distribution
# of reads	5000	20000	100000	150000	200000	250000	300000
p-value RMSE	0.000071	0.000071	0.000071	0.002263	0.000122	0.000160	0.000093
p-value KLD	0.000071	0.000913	0.000071	0.038598	0.006428	0.016540	0.000071
	Uniform distribution
# of reads	5000	20000	100000	150000	200000	250000	300000
p-value RMSE	0.000071	0.000071	0.000071	0.000443	0.000566	0.001449	0.005258
p-value KLD	0.000071	0.000071	0.000122	0.000345	0.000566	0.001449	0.005258
	Skewed distribution
# of reads	5000	20000	100000	150000	200000	250000	300000
p-value RMSE	0.000071	0.000071	0.027823	0.000071	0.000720	0.000093	0.000071
p-value KLD	0.000071	0.000071	0.027823	0.000071	0.001152	0.001152	0.000071

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ISSN: 1471-2105

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