Table 2 RMSD and LDME for the larger instance set.
From: Solving the molecular distance geometry problem with inaccurate distance data
〈LDME〉 | 〈RMSD〉 | ||||||
|---|---|---|---|---|---|---|---|
PDB | |V| | lsbuild | buildup | dgsol | lsbuild | buildup | dgsol |
1PTQ | 402 | 2.61E-03 | 1.80E+00 | 5.41E-01 | 1.31E-02 | 9.49E+00 | 6.89E+00 |
1LFB | 641 | 2.03E-04 | 1.84E+00 | 3.91E-01 | 4.19E-03 | 1.23E+01 | 5.48E+00 |
1AX8 | 1003 | 2.00E-04 | 1.83E+00 | 4.33E-01 | 1.62E-02 | 1.35E+01 | 7.95E+00 |
1F39 | 1534 | 3.03E-02 | 1.89E+00 | 4.74E-01 | 4.22E-01 | 1.79E+01 | 1.28E+01 |
1RGS | 2015 | 1.08E-01 | 1.87E+00 | 4.73E-01 | 1.74E+00 | 1.92E+01 | 1.35E+01 |
1KDH | 2846 | 1.39E-02 | 1.86E+00 | 5.19E-01 | 9.43E-02 | 2.11E+01 | 1.61E+01 |
1BPM | 3671 | 2.20E-02 | 1.90E+00 | 5.14E-01 | 7.86E-02 | 2.29E+01 | 1.55E+01 |
1TOA | 4292 | 6.90E-03 | 1.89E+00 | 6.75E-01 | 2.56E-01 | 2.52E+01 | 2.39E+01 |
1MQQ | 5681 | 1.93E-02 | 1.91E+00 | 8.86E-01 | 1.89E-01 | 2.50E+01 | 2.50E+01 |