Skip to main content

Table 1 Characteristics of the whole-genome haplotype block partitions obtained with the WP and AV methods

From: Efficient haplotype block recognition of very long and dense genetic sequences

 

WP

AV

 

Median

Min

Max

Median

Min

Max

 

HapMapII

  

No. of SNPs per Block

6

5

7

12

7

14

% of SNPs in Blocks

89.6

85.8

91.4

98.5

97.2

98.8

Diversity in Block

0.992

0.992

0.992

0.975

0.975

0.983

 

1000G

  

No. of SNPs per Block

–

–

–

25

13

34

% of SNPs in Blocks

–

–

–

99.4

99.1

99.6

Diversity in Block

–

–

–

0.944

0.929

0.971